Reaching Others University at Buffalo - The State University of New York
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R

R is a software environment for statistical computing and graphics.

Category:  Bioinformatics/Statistics

 

Usage Notes
To show the software versions
    module avail R

Loading the module will set the path and any necessary variables
   module load R/version

Rmpi, an interface to MPI (Message-Passing Interface), is available with versions of R 2.11.1 and greater.  A sample SLURM script is in the /util/academic/R directory.

Additional Information
Numerous add-on packages for R have been installed. A complete list for a given version may be viewed using the following command:
   cat $R_DIR/PkgList.txt

To install an R package in user (or projects) space:
     R CMD INSTALL -l /path/to/user/space/rlibs package

To load an R pacakge from user (or projects) space:
     library(pacakge, lib.loc="/path/to/user/space/rlibs/")