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VMD

VMD ia a molecular visualization program for displaying, animating, and analyzing large biomolecular systems using 3-D graphics and built-in scripting.

Category:  Visualization

VMD uses OpenGL to provide high-performance 3D graphics. 

This package is integrated with babel, which can read molecular data files from CHARMM and X-PLOR as well as PDB files.

Can export displayed graphics to files which may be processed by a number of popular ray tracing and image rendering packages, including POV-Ray.

Usage Notes:

Show the software versions:  module avail vmd

Loading the module will set the path and any necessary variables:  module load vmd/version